Introduction to Galaxy Australia: RNA-seq (JCU - Cairns Campus)
Tue 23
October 2018
1:00 PM
- 4:00 PM
Ended
INTRODUCTION GALAXY AUSTRALIA: DIFFERENTIAL GENE EXPRESSION FROM
BACTERIAL RNA-SEQ DATA
THIS WORKSHOP WILL INTRODUCE ATTENDEES TO GALAXY AUSTRALIA AND ITS USE
IN RNA-SEQ AND DIFFERENTIAL GENE EXPRESSION (USING BACTERIAL DATA). A
TALK AND DEMONSTRATION WILL BE FOLLOWED BY A HANDS-ON TUTORIAL.
THE WORKSHOP HAS BEEN ORGANISED BY THE BIOSCIENCES DATA ENHANCED
VIRTUAL LAB (DEVL) GALAXY AUSTRALIA PROJECT AND EMBL-ABR AND WILL BE
LED BY DR ANNA SYME FROM MELBOURNE BIOINFORMATICS, WHO IS COORDINATING
TRAINING FOR GALAXY AUSTRALIA. ANNA WILL LEAD THE WORKSHOP FROM
MELBOURNE, WITH TRAINED FACILITATORS ON HAND AT VENUES ACROSS
AUSTRALIA TO ASSIST PARTICIPANTS LOCALLY.
INTENDED AUDIENCE
Researchers and students with an interest in RNA-seq and differential
gene expression.
Knowledge of basic biology is assumed.
LEARNING OUTCOMES
By the end of this training, participants will be able to use tools in
Galaxy Australia to investigate differential gene expression from
bacterial RNA-seq data.
TOPICS TO BE COVERED
_Galaxy Australia_
*
Log in.
_RNA-seq_
*
What is it?
*
How can we use Galaxy Australia and RNA-seq data to investigate
differential gene expression in bacteria?
_Visualizing results_
*
We will use the web tool Degust [http://degust.erc.monash.edu/] to
visualize our results.
WHAT TO BRING
Please bring along your own laptop with an up to date web browser
installed (Chrome or Firefox are fine).
_THIS WORKSHOP IS PART OF A SERIES OF GALAXY AUSTRALIA
[http://www.embl-abr.org.au/about/events/] EVENTS. IF YOU'D LIKE TO
HEAR WHEN REGISTRATIONS OPEN FOR OTHER EVENTS, PLEASE SUBSCRIBE TO
EMBL-ABR NEWS [https://www.embl-abr.org.au/embl-abr-news/]._
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Precinct E, Building E5, Room 101
James Cook University (Cairns Campus), Smithfield, 4878, QLD, Australia